CSMC-Phylo

Description

CSMC-Phylo is a Bayesian phylogenetic inference tool to approximate posterior phylogenetic tree distributions based on a Combinatorial Sequential Monte Carlo (CSMC) Method, and to infer evolutionary parameters by combining CSMC and the Markov Chain Monte Carlo approach (MCMC). Alpha-release-0 contains the raw data and the code for replicating the main experiments in the paper below. The tool is currently in alpha version and is not yet ready for day-to-day usage, but we are working on releasing a more user-friendly version with source code.

Citation

Please use the following citation if you use the software:
To be added later ...

Links